A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19405



Internal ID15840471
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87239485..87241870hg38UCSC Ensembl
Outerchr10:87238732..87246480hg38UCSC Ensembl
Innerchr10:88999242..89001627hg19UCSC Ensembl
Outerchr10:88998489..89006237hg19UCSC Ensembl
Innerchr10:88989222..88991607hg18UCSC Ensembl
Outerchr10:88988469..88996217hg18UCSC Ensembl
Innerchr10:88989222..88991607hg17UCSC Ensembl
Outerchr10:88988469..88996217hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg387749
hg197749
hg187749
hg177749
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18980
Known GenesNUTM2A-AS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19405
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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