A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19401



Internal ID15491967
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:15190616..15193360hg38UCSC Ensembl
Outerchr8:15189930..15193989hg38UCSC Ensembl
Innerchr8:15048125..15050869hg19UCSC Ensembl
Outerchr8:15047439..15051498hg19UCSC Ensembl
Innerchr8:15092496..15095240hg18UCSC Ensembl
Outerchr8:15091810..15095869hg18UCSC Ensembl
Innerchr8:15092496..15095240hg17UCSC Ensembl
Outerchr8:15091810..15095869hg17UCSC Ensembl
Cytoband8p22
Allele length
AssemblyAllele length
hg384060
hg194060
hg184060
hg174060
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8298
Supporting Variants
SamplesNA18860
Known GenesSGCZ
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19401
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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