A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19345



Internal ID15840448
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87000675..87010058hg38UCSC Ensembl
Outerchr10:87000260..87012315hg38UCSC Ensembl
Innerchr10:88760432..88769815hg19UCSC Ensembl
Outerchr10:88760017..88772072hg19UCSC Ensembl
Innerchr10:88750412..88759795hg18UCSC Ensembl
Outerchr10:88749997..88762052hg18UCSC Ensembl
Innerchr10:88750412..88759795hg17UCSC Ensembl
Outerchr10:88749997..88762052hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3812056
hg1912056
hg1812056
hg1712056
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8712
Supporting Variants
SamplesNA18980
Known GenesAGAP11
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19345
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer