A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19300



Internal ID15831885
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:23174492..23201297hg38UCSC Ensembl
Outerchr15:23174492..23202687hg38UCSC Ensembl
Innerchr15:22671771..22700477hg19UCSC Ensembl
Outerchr15:22670381..22701513hg19UCSC Ensembl
Innerchr15:20223135..20251841hg18UCSC Ensembl
Outerchr15:20221745..20252877hg18UCSC Ensembl
Innerchr15:20223135..20251841hg17UCSC Ensembl
Outerchr15:20221745..20252877hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3828196
hg1931133
hg1831133
hg1731133
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9181
Supporting Variants
SamplesNA12802
Known GenesMIR4509-1, MIR4509-2, MIR4509-3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19300
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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