A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19247



Internal ID15836032
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:45827402..45835281hg38UCSC Ensembl
Outerchr10:45826961..45835502hg38UCSC Ensembl
Innerchr10:46322850..46330729hg19UCSC Ensembl
Outerchr10:46322409..46330950hg19UCSC Ensembl
Innerchr10:45642856..45650735hg18UCSC Ensembl
Outerchr10:45642415..45650956hg18UCSC Ensembl
Innerchr10:45642856..45650735hg17UCSC Ensembl
Outerchr10:45642415..45650956hg17UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg388542
hg198542
hg188542
hg178542
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8630
Supporting Variants
SamplesNA18563
Known GenesAGAP4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19247
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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