A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19240



Internal ID15831883
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22054635..22054980hg38UCSC Ensembl
Outerchr15:22054201..22055356hg38UCSC Ensembl
Innerchr15:22342586..22342931hg19UCSC Ensembl
Outerchr15:22342152..22343307hg19UCSC Ensembl
Innerchr15:19843950..19844295hg18UCSC Ensembl
Outerchr15:19843516..19844671hg18UCSC Ensembl
Innerchr15:19843950..19844295hg17UCSC Ensembl
Outerchr15:19843516..19844671hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg381156
hg191156
hg181156
hg171156
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12802
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19240
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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