A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19216



Internal ID15835365
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87477759..87499240hg38UCSC Ensembl
Outerchr10:87476492..87499699hg38UCSC Ensembl
Innerchr10:89237516..89258997hg19UCSC Ensembl
Outerchr10:89236249..89259456hg19UCSC Ensembl
Innerchr10:89227496..89248977hg18UCSC Ensembl
Outerchr10:89226229..89249436hg18UCSC Ensembl
Innerchr10:89227496..89248977hg17UCSC Ensembl
Outerchr10:89226229..89249436hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3823208
hg1923208
hg1823208
hg1723208
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8721
Supporting Variants
SamplesNA18552
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19216
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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