A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1920



Internal ID15194517
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1875610..1922078hg38UCSC Ensembl
Outerchr11:1896840..1943308hg19UCSC Ensembl
Outerchr11:1853416..1899884hg18UCSC Ensembl
Outerchr11:1853416..1899884hg17UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg3846469
hg1946469
hg1846469
hg1746469
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7643
Supporting Variants
SamplesNA18555
Known GenesLSP1, TNNT3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv1920
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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