A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19199



Internal ID15843146
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46840043..46869310hg38UCSC Ensembl
Outerchr10:46839708..46869731hg38UCSC Ensembl
Innerchr10:46683151..46712786hg19UCSC Ensembl
Outerchr10:46682730..46713125hg19UCSC Ensembl
Innerchr10:46103157..46132792hg18UCSC Ensembl
Outerchr10:46102736..46133131hg18UCSC Ensembl
Innerchr10:46103157..46132792hg17UCSC Ensembl
Outerchr10:46102736..46133131hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3830024
hg1930396
hg1830396
hg1730396
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19173
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19199
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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