A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19187



Internal ID15836111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:20540612..20554394hg38UCSC Ensembl
Outerchr10:20537938..20562011hg38UCSC Ensembl
Innerchr10:20829541..20843323hg19UCSC Ensembl
Outerchr10:20826867..20850940hg19UCSC Ensembl
Innerchr10:20869547..20883329hg18UCSC Ensembl
Outerchr10:20866873..20890946hg18UCSC Ensembl
Innerchr10:20869547..20883329hg17UCSC Ensembl
Outerchr10:20866873..20890946hg17UCSC Ensembl
Cytoband10p12.31
Allele length
AssemblyAllele length
hg3824074
hg1924074
hg1824074
hg1724074
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8611
Supporting Variants
SamplesNA18563
Known GenesMIR4675
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19187
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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