A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19156



Internal ID15835362
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87012315..87024506hg38UCSC Ensembl
Outerchr10:87010058..87025766hg38UCSC Ensembl
Innerchr10:88772072..88784263hg19UCSC Ensembl
Outerchr10:88769815..88785523hg19UCSC Ensembl
Innerchr10:88762052..88774243hg18UCSC Ensembl
Outerchr10:88759795..88775503hg18UCSC Ensembl
Innerchr10:88762052..88774243hg17UCSC Ensembl
Outerchr10:88759795..88775503hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3815709
hg1915709
hg1815709
hg1715709
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8712
Supporting Variants
SamplesNA18552
Known GenesAGAP11, FAM25A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19156
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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