A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19150



Internal ID15831880
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20554184..20559423hg38UCSC Ensembl
Outerchr15:20553841..20559875hg38UCSC Ensembl
Innerchr15:20759499..20764740hg19UCSC Ensembl
Outerchr15:20759156..20765192hg19UCSC Ensembl
Innerchr15:19019513..19024754hg18UCSC Ensembl
Outerchr15:19019170..19025206hg18UCSC Ensembl
Innerchr15:19019513..19024754hg17UCSC Ensembl
Outerchr15:19019170..19025206hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg386035
hg196037
hg186037
hg176037
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12802
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19150
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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