A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19130



Internal ID15837807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117079..87213827hg38UCSC Ensembl
Outerchr10:87115880..87214482hg38UCSC Ensembl
Innerchr10:88876836..88973584hg19UCSC Ensembl
Outerchr10:88875637..88974239hg19UCSC Ensembl
Innerchr10:88866816..88963564hg18UCSC Ensembl
Outerchr10:88865617..88964219hg18UCSC Ensembl
Innerchr10:88866816..88963564hg17UCSC Ensembl
Outerchr10:88865617..88964219hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3898603
hg1998603
hg1898603
hg1798603
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18853
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19130
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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