A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19024



Internal ID15828325
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47539347..47541438hg38UCSC Ensembl
Outerchr10:47538813..47541721hg38UCSC Ensembl
Innerchr10:48938785..48940466hg19UCSC Ensembl
Outerchr10:48938251..48940749hg19UCSC Ensembl
Innerchr10:48558791..48560472hg18UCSC Ensembl
Outerchr10:48558257..48560755hg18UCSC Ensembl
Innerchr10:48558791..48560472hg17UCSC Ensembl
Outerchr10:48558257..48560755hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg382909
hg192499
hg182499
hg172499
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA10839
Known GenesBMS1P1, BMS1P5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19024
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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