A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19019



Internal ID15843080
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:4395706..4398550hg38UCSC Ensembl
Outerchr10:4394918..4400012hg38UCSC Ensembl
Innerchr10:4437898..4440742hg19UCSC Ensembl
Outerchr10:4437110..4442204hg19UCSC Ensembl
Innerchr10:4427898..4430742hg18UCSC Ensembl
Outerchr10:4427110..4432204hg18UCSC Ensembl
Innerchr10:4427898..4430742hg17UCSC Ensembl
Outerchr10:4427110..4432204hg17UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg385095
hg195095
hg185095
hg175095
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8598
Supporting Variants
SamplesNA19173
Known GenesLINC00703
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19019
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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