A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18917



Internal ID15489140
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:84210708..84297888hg38UCSC Ensembl
Outerchr9:84134385..84404222hg38UCSC Ensembl
Innerchr9:86825623..86912803hg19UCSC Ensembl
Outerchr9:86749300..87019137hg19UCSC Ensembl
Innerchr9:86015443..86102623hg18UCSC Ensembl
Outerchr9:85939120..86208957hg18UCSC Ensembl
Innerchr9:84055177..84142357hg17UCSC Ensembl
Outerchr9:83978854..84248691hg17UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg38269838
hg19269838
hg18269838
hg17269838
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8542
Supporting Variants
SamplesNA18563
Known GenesSLC28A3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18917
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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