A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18877



Internal ID15830165
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46798896..46800577hg38UCSC Ensembl
Outerchr10:46798613..46801111hg38UCSC Ensembl
Innerchr10:46749016..46750698hg19UCSC Ensembl
Outerchr10:46748482..46750981hg19UCSC Ensembl
Innerchr10:46169022..46170704hg18UCSC Ensembl
Outerchr10:46168488..46170987hg18UCSC Ensembl
Innerchr10:46169022..46170704hg17UCSC Ensembl
Outerchr10:46168488..46170987hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg382499
hg192500
hg182500
hg172500
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA11830
Known GenesBMS1P1, BMS1P5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18877
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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