A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18825



Internal ID15835096
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:38685696..38742958hg38UCSC Ensembl
Outerchr10:38685508..38743909hg38UCSC Ensembl
Innerchr10:38978827..39036089hg19UCSC Ensembl
Outerchr10:38978639..39037040hg19UCSC Ensembl
Innerchr10:39018833..39076095hg18UCSC Ensembl
Outerchr10:39018645..39077046hg18UCSC Ensembl
Innerchr10:39018833..39076095hg17UCSC Ensembl
Outerchr10:39018645..39077046hg17UCSC Ensembl
Cytoband10p11.1
Allele length
AssemblyAllele length
hg3858402
hg1958402
hg1858402
hg1758402
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8620
Supporting Variants
SamplesNA18537
Known GenesACTR3BP5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18825
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer