A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18625



Internal ID15840725
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46349503..46358879hg38UCSC Ensembl
Outerchr10:46349339..46360465hg38UCSC Ensembl
Innerchr10:47720732..47730098hg19UCSC Ensembl
Outerchr10:47720568..47731682hg19UCSC Ensembl
Innerchr10:47190738..47200104hg18UCSC Ensembl
Outerchr10:47190574..47201688hg18UCSC Ensembl
Innerchr10:47190738..47200104hg17UCSC Ensembl
Outerchr10:47190574..47201688hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3811127
hg1911115
hg1811115
hg1711115
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18980
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18625
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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