A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18535



Internal ID15840691
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46238330..46248523hg38UCSC Ensembl
Outerchr10:46237933..46248826hg38UCSC Ensembl
Innerchr10:47609566..47619759hg19UCSC Ensembl
Outerchr10:47609169..47620062hg19UCSC Ensembl
Innerchr10:47079572..47089765hg18UCSC Ensembl
Outerchr10:47079175..47090068hg18UCSC Ensembl
Innerchr10:47079572..47089765hg17UCSC Ensembl
Outerchr10:47079175..47090068hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3810894
hg1910894
hg1810894
hg1710894
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18980
Known GenesANTXRLP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18535
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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