A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18505



Internal ID15840685
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46998704..47586198hg19UCSC Ensembl
Outerchr10:46998307..47587348hg19UCSC Ensembl
Innerchr10:46418710..47056204hg18UCSC Ensembl
Outerchr10:46418313..47057354hg18UCSC Ensembl
Innerchr10:46418710..47056204hg17UCSC Ensembl
Outerchr10:46418313..47057354hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg19589042
hg18639042
hg17639042
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18980
Known GenesAGAP9, ANXA8, BMS1P2, BMS1P6, FAM25C, FAM25G, FAM35DP, GPRIN2, HNRNPA1P33, LINC00842, LOC100996758, NPY4R
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18505
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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