A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18343



Internal ID15486772
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:102643644..102691799hg38UCSC Ensembl
Outerchr7:102642788..102692752hg38UCSC Ensembl
Innerchr7:102284091..102332246hg19UCSC Ensembl
Outerchr7:102283235..102333199hg19UCSC Ensembl
Innerchr7:102071327..102119482hg18UCSC Ensembl
Outerchr7:102070471..102120435hg18UCSC Ensembl
Innerchr7:101878042..101926197hg17UCSC Ensembl
Outerchr7:101877186..101927150hg17UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg3849965
hg1949965
hg1849965
hg1749965
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8192
Supporting Variants
SamplesNA18504
Known GenesPOLR2J2, POLR2J3, SPDYE2, SPDYE2B, UPK3BL
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv18343
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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