A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv18270532



Internal ID20837572
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:29766029..31471345hg38UCSC Ensembl
chr6:29733806..31439122hg19UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg381705317
hg191705317
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv6562568
Supporting Variants
Samples
Known GenesABCF1, ATAT1, C6orf136, C6orf15, CCHCR1, CDSN, DDR1, DHX16, DPCR1, FLOT1, GNL1, GTF2H4, HCG17, HCG18, HCG22, HCG26, HCG27, HCG4, HCG4B, HCG8, HCG9, HCP5, HLA-A, HLA-B, HLA-C, HLA-E, HLA-G, HLA-H, HLA-J, HLA-L, IER3, LOC554223, MDC1, MICA, MIR4640, MIR6891, MIR877, MRPS18B, MUC21, MUC22, NRM, POU5F1, PPP1R10, PPP1R11, PPP1R18, PRR3, PSORS1C1, PSORS1C2, PSORS1C3, RNF39, RPP21, SFTA2, TCF19, TRIM10, TRIM15, TRIM26, TRIM31, TRIM39, TRIM39-RPP21, TRIM40, TUBB, VARS2, ZNRD1, ZNRD1-AS1
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)nssv18270532
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.00085


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