A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17936



Internal ID15841518
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:45692454..45701936hg38UCSC Ensembl
Outerchr10:45692123..45702554hg38UCSC Ensembl
Innerchr10:46187902..46197384hg19UCSC Ensembl
Outerchr10:46187571..46198002hg19UCSC Ensembl
Innerchr10:45507908..45517390hg18UCSC Ensembl
Outerchr10:45507577..45518008hg18UCSC Ensembl
Innerchr10:45507908..45517390hg17UCSC Ensembl
Outerchr10:45507577..45518008hg17UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg3810432
hg1910432
hg1810432
hg1710432
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8628
Supporting Variants
SamplesNA19007
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17936
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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