A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17899



Internal ID15490486
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:131916694..131920383hg38UCSC Ensembl
Outerchr10:131916117..131921066hg38UCSC Ensembl
Innerchr10:133730198..133733887hg19UCSC Ensembl
Outerchr10:133729621..133734570hg19UCSC Ensembl
Innerchr10:133580188..133583877hg18UCSC Ensembl
Outerchr10:133579611..133584560hg18UCSC Ensembl
Innerchr10:133580188..133583877hg17UCSC Ensembl
Outerchr10:133579611..133584560hg17UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg384950
hg194950
hg184950
hg174950
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8742
Supporting Variants
SamplesNA18572
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17899
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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