A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17885



Internal ID15828999
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:125886822..125919894hg38UCSC Ensembl
Outerchr10:125884747..125928907hg38UCSC Ensembl
Innerchr10:127575391..127608463hg19UCSC Ensembl
Outerchr10:127573316..127617476hg19UCSC Ensembl
Innerchr10:127565381..127598453hg18UCSC Ensembl
Outerchr10:127563306..127607466hg18UCSC Ensembl
Innerchr10:127565381..127598453hg17UCSC Ensembl
Outerchr10:127563306..127607466hg17UCSC Ensembl
Cytoband10q26.2
Allele length
AssemblyAllele length
hg3844161
hg1944161
hg1844161
hg1744161
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8738
Supporting Variants
SamplesNA10847
Known GenesFANK1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17885
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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