A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17596



Internal ID15835263
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:38776365..38964216hg38UCSC Ensembl
Outerchr9:38776139..38964722hg38UCSC Ensembl
Innerchr9:38776362..38964213hg19UCSC Ensembl
Outerchr9:38776136..38964719hg19UCSC Ensembl
Innerchr9:38766362..38954213hg18UCSC Ensembl
Outerchr9:38766136..38954719hg18UCSC Ensembl
Innerchr9:38766362..38954213hg17UCSC Ensembl
Outerchr9:38766136..38954719hg17UCSC Ensembl
Cytoband9p13.1
Allele length
AssemblyAllele length
hg38188584
hg19188584
hg18188584
hg17188584
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8446
Supporting Variants
SamplesNA18552
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17596
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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