A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17560



Internal ID15831819
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117079..87216173hg38UCSC Ensembl
Outerchr10:87115880..87216943hg38UCSC Ensembl
Innerchr10:88876836..88975930hg19UCSC Ensembl
Outerchr10:88875637..88976700hg19UCSC Ensembl
Innerchr10:88866816..88965910hg18UCSC Ensembl
Outerchr10:88865617..88966680hg18UCSC Ensembl
Innerchr10:88866816..88965910hg17UCSC Ensembl
Outerchr10:88865617..88966680hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg38101064
hg19101064
hg18101064
hg17101064
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA12802
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17560
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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