A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17522



Internal ID15827233
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:81988568..81995643hg38UCSC Ensembl
Outerchr9:81987614..81996433hg38UCSC Ensembl
Innerchr9:84603483..84610558hg19UCSC Ensembl
Outerchr9:84602529..84611348hg19UCSC Ensembl
Innerchr9:83793303..83800378hg18UCSC Ensembl
Outerchr9:83792349..83801168hg18UCSC Ensembl
Innerchr9:81833037..81840112hg17UCSC Ensembl
Outerchr9:81832083..81840902hg17UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg388820
hg198820
hg188820
hg178820
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8537
Supporting Variants
SamplesNA07029
Known GenesSPATA31D1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17522
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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