A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17479



Internal ID15836896
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:57811592..58011622hg38UCSC Ensembl
Outerchr10:57811017..58012038hg38UCSC Ensembl
Innerchr10:59571352..59771382hg19UCSC Ensembl
Outerchr10:59570777..59771798hg19UCSC Ensembl
Innerchr10:59241358..59441388hg18UCSC Ensembl
Outerchr10:59240783..59441804hg18UCSC Ensembl
Innerchr10:59241358..59441388hg17UCSC Ensembl
Outerchr10:59240783..59441804hg17UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg38201022
hg19201022
hg18201022
hg17201022
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8677
Supporting Variants
SamplesNA18572
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17479
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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