A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17427681



Internal ID22485551
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9996659..11875087hg38UCSC Ensembl
chr3:10038343..11916561hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg381878429
hg191878219
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv5904127
Supporting Variants
Samples
Known GenesATG7, ATP2B2, BRK1, CIDECP, EMC3-AS1, FANCD2, FANCD2OS, GHRL, GHRLOS, HRH1, IRAK2, LINC00606, LINC00852, LOC401052, MIR885, SEC13, SLC6A1, SLC6A11, SLC6A1-AS1, TAMM41, TATDN2, VGLL4, VHL
MethodSequencing
Analysis
Platform
Comments
ReferenceAlmarri_et_al_2020
Pubmed ID32531199
Accession Number(s)nssv17427681
Frequency
Sample Size914
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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