A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17359591



Internal ID22585260
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:55273256..58053631hg38UCSC Ensembl
chr11:55040732..57821103hg19UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg382780376
hg192780372
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv5914325
Supporting Variants
Samples
Known GenesAPLNR, BTBD18, C11orf31, CLP1, CTNND1, LRRC55, MED19, MIR130A, MIR6128, OR10AG1, OR4A15, OR4A16, OR4C11, OR4C15, OR4C16, OR4C6, OR4P4, OR4S2, OR5AK2, OR5AK4P, OR5AP2, OR5AR1, OR5AS1, OR5D13, OR5D14, OR5D16, OR5D18, OR5F1, OR5I1, OR5J2, OR5L1, OR5L2, OR5M1, OR5M10, OR5M11, OR5M3, OR5M8, OR5M9, OR5R1, OR5T1, OR5T2, OR5T3, OR5W2, OR6Q1, OR7E5P, OR8H1, OR8H2, OR8H3, OR8I2, OR8J1, OR8J3, OR8K1, OR8K3, OR8K5, OR8U1, OR8U8, OR9G1, OR9G4, OR9G9, OR9Q1, P2RX3, PRG2, PRG3, RTN4RL2, SERPING1, SLC43A1, SLC43A3, SMTNL1, SSRP1, TIMM10, TMX2, TMX2-CTNND1, TNKS1BP1, TRIM51, TRIM51HP, UBE2L6, YPEL4, ZDHHC5
MethodSequencing
Analysis
Platform
Comments
ReferenceAlmarri_et_al_2020
Pubmed ID32531199
Accession Number(s)nssv17359591
Frequency
Sample Size914
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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