A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17272



Internal ID15839033
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46843556..46861029hg38UCSC Ensembl
Outerchr10:46843083..46862128hg38UCSC Ensembl
Innerchr10:46691596..46709274hg19UCSC Ensembl
Outerchr10:46690321..46709748hg19UCSC Ensembl
Innerchr10:46111602..46129280hg18UCSC Ensembl
Outerchr10:46110327..46129754hg18UCSC Ensembl
Innerchr10:46111602..46129280hg17UCSC Ensembl
Outerchr10:46110327..46129754hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3819046
hg1919428
hg1819428
hg1719428
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18942
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17272
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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