A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17201



Internal ID15832224
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47601109..47621981hg38UCSC Ensembl
Outerchr10:47601046..47622279hg38UCSC Ensembl
Innerchr10:49000045..49020939hg19UCSC Ensembl
Outerchr10:48999982..49021250hg19UCSC Ensembl
Innerchr10:48620051..48640945hg18UCSC Ensembl
Outerchr10:48619988..48641256hg18UCSC Ensembl
Innerchr10:48620051..48640945hg17UCSC Ensembl
Outerchr10:48619988..48641256hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3821234
hg1921269
hg1821269
hg1721269
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA12872
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17201
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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