A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17179



Internal ID15837047
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46769465..46771253hg38UCSC Ensembl
Outerchr10:46769452..46772008hg38UCSC Ensembl
Innerchr10:48168402..48170181hg19UCSC Ensembl
Outerchr10:48168389..48170939hg19UCSC Ensembl
Innerchr10:47788408..47790187hg18UCSC Ensembl
Outerchr10:47788395..47790945hg18UCSC Ensembl
Innerchr10:47788408..47790187hg17UCSC Ensembl
Outerchr10:47788395..47790945hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg382557
hg192551
hg182551
hg172551
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18572
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17179
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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