A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17171



Internal ID15832244
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47567886..47575351hg38UCSC Ensembl
Outerchr10:47567223..47581275hg38UCSC Ensembl
Innerchr10:48966811..48974294hg19UCSC Ensembl
Outerchr10:48966148..48980225hg19UCSC Ensembl
Innerchr10:48586817..48594300hg18UCSC Ensembl
Outerchr10:48586154..48600231hg18UCSC Ensembl
Innerchr10:48586817..48594300hg17UCSC Ensembl
Outerchr10:48586154..48600231hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3814053
hg1914078
hg1814078
hg1714078
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA12872
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17171
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer