A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17149



Internal ID15837060
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46718060..46739314hg38UCSC Ensembl
Outerchr10:46717745..46739377hg38UCSC Ensembl
Innerchr10:48117017..48138250hg19UCSC Ensembl
Outerchr10:48116704..48138313hg19UCSC Ensembl
Innerchr10:47737023..47758256hg18UCSC Ensembl
Outerchr10:47736710..47758319hg18UCSC Ensembl
Innerchr10:47737023..47758256hg17UCSC Ensembl
Outerchr10:47736710..47758319hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3821633
hg1921610
hg1821610
hg1721610
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18572
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17149
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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