A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv17140



Internal ID15831804
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46840138..46859383hg38UCSC Ensembl
Outerchr10:46840057..46860696hg38UCSC Ensembl
Innerchr10:46693426..46712691hg19UCSC Ensembl
Outerchr10:46692113..46712772hg19UCSC Ensembl
Innerchr10:46113432..46132697hg18UCSC Ensembl
Outerchr10:46112119..46132778hg18UCSC Ensembl
Innerchr10:46113432..46132697hg17UCSC Ensembl
Outerchr10:46112119..46132778hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3820640
hg1920660
hg1820660
hg1720660
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA12802
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv17140
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer