A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv16946



Internal ID15841042
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:38909971..38909984hg38UCSC Ensembl
Outerchr9:38909656..38911027hg38UCSC Ensembl
Innerchr9:38909968..38909981hg19UCSC Ensembl
Outerchr9:38909653..38911024hg19UCSC Ensembl
Innerchr9:38899968..38899981hg18UCSC Ensembl
Outerchr9:38899653..38901024hg18UCSC Ensembl
Innerchr9:38899968..38899981hg17UCSC Ensembl
Outerchr9:38899653..38901024hg17UCSC Ensembl
Cytoband9p13.1
Allele length
AssemblyAllele length
hg381372
hg191372
hg181372
hg171372
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8446
Supporting Variants
SamplesNA19007
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv16946
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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