A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1679



Internal ID15194276
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:102508019..102626561hg38UCSC Ensembl
Outerchr7:102148466..102267008hg19UCSC Ensembl
Outerchr7:101935471..102054247hg18UCSC Ensembl
Outerchr7:101742186..101860962hg17UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg38118543
hg19118543
hg18118777
hg17118777
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5879
Supporting Variants
SamplesNA18555
Known GenesPOLR2J3, RASA4, RASA4B, SPDYE2, SPDYE2B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv1679
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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