A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1676229



Internal ID15187051
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:16127738..16284512hg38UCSC Ensembl
Innerchr16:16221595..16378369hg19UCSC Ensembl
Innerchr16:16129096..16285870hg18UCSC Ensembl
Innerchr16:16187949..16344723hg16UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38156775
hg19156775
hg18156775
hg16156775
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469785
Supporting Variants
Samples
Known GenesABCC1, ABCC6, NOMO3
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1676229
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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