A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1676181



Internal ID15187003
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:951640..1144486hg38UCSC Ensembl
Innerchr19:951640..1144485hg19UCSC Ensembl
Innerchr19:902640..1095485hg18UCSC Ensembl
Innerchr19:902640..1095485hg16UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38192847
hg19192846
hg18192846
hg16192846
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469845
Supporting Variants
Samples
Known GenesABCA7, ARID3A, CNN2, GPX4, GRIN3B, HMHA1, POLR2E, SBNO2, TMEM259, WDR18
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1676181
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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