A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1675606



Internal ID15533114
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:6164572..6330190hg38UCSC Ensembl
InnerchrY:6032613..6198231hg19UCSC Ensembl
InnerchrY:6092613..6258231hg18UCSC Ensembl
InnerchrY:5735569..5901187hg16UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg38165619
hg19165619
hg18165619
hg16165619
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469876
Supporting Variants
Samples
Known GenesTSPY2, TTTY23, TTTY23B
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1675606
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer