A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1675297



Internal ID15186119
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:167086888..167245044hg38UCSC Ensembl
Innerchr6:167500376..167658532hg19UCSC Ensembl
Innerchr6:167420366..167578522hg18UCSC Ensembl
Innerchr6:167409664..167567820hg16UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38158157
hg19158157
hg18158157
hg16158157
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469673
Supporting Variants
Samples
Known GenesCCR6, GPR31, TCP10L2
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1675297
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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