A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1674709



Internal ID15185531
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:46139380..46300887hg38UCSC Ensembl
Innerchr17:44216746..44378253hg19UCSC Ensembl
Innerchr17:41572523..41734030hg18UCSC Ensembl
Innerchr17:44692162..44853669hg16UCSC Ensembl
Cytoband17q21.31
Allele length
AssemblyAllele length
hg38161508
hg19161508
hg18161508
hg16161508
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469697
Supporting Variants
Samples
Known GenesARL17A, ARL17B, KANSL1, KANSL1-AS1, LOC644172, LRRC37A
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1674709
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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