A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1674312



Internal ID15531820
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55678817..55851147hg38UCSC Ensembl
Innerchr11:55446293..55618623hg19UCSC Ensembl
Innerchr11:55202869..55375199hg18UCSC Ensembl
Innerchr11:55221653..55393983hg16UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg38172331
hg19172331
hg18172331
hg16172331
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469885
Supporting Variants
Samples
Known GenesOR5D13, OR5D14, OR5D16, OR5D18, OR5L1, OR5L2
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1674312
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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