A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1674151



Internal ID15531659
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:195896851..196068603hg38UCSC Ensembl
Innerchr3:195623722..195795474hg19UCSC Ensembl
Innerchr3:197108119..197279871hg18UCSC Ensembl
Innerchr3:196950243..197121995hg16UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg38171753
hg19171753
hg18171753
hg16171753
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469518
Supporting Variants
Samples
Known GenesSDHAP1, TFRC, TNK2
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1674151
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer