A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1673174



Internal ID15530682
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:31593797..31682197hg38UCSC Ensembl
Innerchr15:31886000..31974400hg19UCSC Ensembl
Innerchr15:29673292..29761692hg18UCSC Ensembl
Innerchr15:29602056..29690456hg16UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3888401
hg1988401
hg1888401
hg1688401
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469569
Supporting Variants
Samples
Known GenesOTUD7A
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1673174
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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