A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1673118



Internal ID15183940
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:99974920..100157518hg38UCSC Ensembl
Innerchr7:99572543..99755141hg19UCSC Ensembl
Innerchr7:99410479..99593077hg18UCSC Ensembl
Innerchr7:99183940..99366538hg16UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg38182599
hg19182599
hg18182599
hg16182599
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469687
Supporting Variants
Samples
Known GenesAP4M1, AZGP1, AZGP1P1, C7orf43, CNPY4, COPS6, LAMTOR4, MBLAC1, MCM7, MIR106B, MIR25, MIR4658, MIR93, TAF6, ZKSCAN1, ZNF3, ZSCAN21
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1673118
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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