A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1672770



Internal ID15183592
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:82251148..82472274hg38UCSC Ensembl
Innerchr17:80209024..80430150hg19UCSC Ensembl
Innerchr17:77802313..78023439hg18UCSC Ensembl
Innerchr17:80887837..81108963hg16UCSC Ensembl
Cytoband17q25.3
Allele length
AssemblyAllele length
hg38221127
hg19221127
hg18221127
hg16221127
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv469561
Supporting Variants
Samples
Known GenesC17orf62, CD7, CSNK1D, HEXDC, NARF, OGFOD3, SECTM1, TEX19, UTS2R
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nssv1672770
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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